Order Organism Abbr EG# Screen Condition Reference 1 Acinetobacter baumannii ATCC 17978 acb 458 Rich medium Wang, N., et al. (2014) Genome-wide identification of Acinetobacter baumannii genes necessary for persistence in the lung, MBio, 5, e01163-01114. [PubMed] 2 Acinetobacter baylyi ADP1 aci 499 Rich medium de Berardinis V, et al (2008). A complete collection of single-gene deletion mutants of Acinetobacter baylyi ADP1. Mol Syst Biol. [PubMed] 3 Agrobacterium fabrum str. C58 atu 361 Rich medium Curtis, P.D. and Brun, Y.V. (2014) Identification of essential alphaproteobacterial genes reveals operational variability in conserved developmental and cell cycle systems, Mol. Microbiol., 93, 713-735. [PubMed] 4 Bacillus subtilis 168 bsu 271 Rich medium Kobayashi K, et al (2003). Essential Bacillus subtilis genes. Proc Natl Acad Sci U S A, 100:4678-83. [PubMed] 5 Bacteroides fragilis 638R bfg 547 Rich medium. Yaligara Veeranagouda, et al (2014). "Identification of genes required for the survival of B. fragilis using massive parallel sequencing of a saturated transposon mutant library". BMC Genomics, 15:429. [PubMed] 6 Brevundimonas subvibrioides ATCC 15264 bsb 412 Rich medium Curtis, P.D. and Brun, Y.V. (2014) Identification of essential alphaproteobacterial genes reveals operational variability in conserved developmental and cell cycle systems, Mol. Microbiol., 93, 713-735. [PubMed] 7 Burkholderia pseudomallei K96243 bps 505 Rich medium Moule, M.G., et al. (2014) Genome-Wide Saturation Mutagenesis of Burkholderia pseudomallei K96243 Predicts Essential Genes and Novel Targets for Antimicrobial Development. MBio 5, e00926-00913 [PubMed] 8 Burkholderia thailandensis E264 bte 406 Rich medium. Baugh, Loren, et al. "Combining Functional and Structural Genomics to Sample the Essential Burkholderia Structome." PloS one 8.1 (2013): e53851. [PubMed] 9 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 cje 228 Rich medium Metris, Aline, et al. "In vivo and in silico determination of essential genes of Campylobacter jejuni." BMC genomics 12.1 (2011): 535. [PubMed] 10 Caulobacter crescentus ccr 480 Rich medium Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:528. [PubMed] 11 Escherichia coli MG1655 II eco 296 Rich medium Baba T, et al (2006). Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol Syst Biol. [PubMed] 12 Francisella novicida U112 ftn 392 Rich medium Gallagher LA, et al (2007). A comprehensive transposon mutant library of Francisella novicida, a bioweapon surrogate. Proc Natl Acad Sci U S A, 104:1009-14. [PubMed] 13 Haemophilus influenzae Rd KW20 hin 642 Rich medium Akerley BJ, et al (2002). A genome-scale analysis for identification of genes required for growth or survival of Haemophilus influenzae. Proc Natl Acad Sci U S A, 99:966-71. [PubMed] 14 Mycoplasma genitalium G37 mge 381 Rich medium Glass JI, et al (2006). Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A, 103:425-30. [PubMed] 15 Mycoplasma pulmonis UAB CTIP mpu 310 Rich medium French CT, et al (2008). Large-scale transposon mutagenesis of Mycoplasma pulmonis. Mol Microbiol. [PubMed] 16 Porphyromonas gingivalis ATCC 33277 pgn 463 Rich medium Klein BA, et al (2012). Identification of essential genes of the periodontal pathogen Porphyromonas. BMC Genomics, 13: 578. [PubMed] 17 Pseudomonas aeruginosa PAO1 pae 336 Rich medium Turner, K.H., Wessel, A.K., Palmer, G.C., Murray, J.L. and Whiteley, M. (2015) Essential genome of Pseudomonas aeruginosa in cystic fibrosis sputum. Proc. Natl. Acad. Sci. U. S. A. [PubMed] 18 Rhodopseudomonas palustris CGA009 rpa 522 Rich medium Pechter, Kieran B., et al. "The essential genome of the metabolically versatile alphaproteobacterium Rhodopseudomonas palustris." Journal of bacteriology (2015): JB-00771. [PubMed] 19 Salmonella enterica serovar Typhi Ty2 stt 358 Rich medium Barquist, Lars, et al. "A comparison of dense transposon insertion libraries in the Salmonella serovars Typhi and Typhimurium." Nucleic acids research 41.8 (2013): 4549-4564. [PubMed] 20 Salmonella enterica serovar Typhimurium SL1344 sey 353 Rich medium Barquist, Lars, et al. "A comparison of dense transposon insertion libraries in the Salmonella serovars Typhi and Typhimurium." Nucleic acids research 41.8 (2013): 4549-4564. [PubMed] 21 Salmonella typhimurium LT2 stm 230 Rich medium Knuth K, et al (2004). Large-scale identification of essential Salmonella genes by trapping lethal insertions. Mol Microbiol, 51:1729-44. [PubMed] 22 Shewanella oneidensis MR-1 son 403 Rich medium Deutschbauer, Adam, et al. "Evidence-based annotation of gene function in Shewanella oneidensis MR-1 using genome-wide fitness profiling across 121 conditions." PLoS genetics 7.11 (2011): e1002385. [PubMed] 23 Sphingomonas wittichii RW1 swi 535 Rich medium Roggo, Clemence, et al. "Genome-wide transposon insertion scanning of environmental survival functions in the polycyclic aromatic hydrocarbon degrading bacterium Sphingomonas wittichii RW1." Environmental microbiology (2013). [PubMed] 24 Staphylococcus aureus NCTC 8325 sao 351 Rich medium Chaudhuri RR, et al (2009). Comprehensive identification of essential Staphylococcus aureus genes using Transposon-Mediated Differential Hybridisation (TMDH). BMC Genomics, 10:291. [PubMed] 25 Streptococcus agalactiae A909 sak 317 Rich medium Hooven, T.A. et al. The Essential Genome of Streptococcus Agalactiae.BMC Genomics, 17, 406, 2016. [PubMed] 26 Streptococcus pyogenes MGAS5448 spz 227 Todd-Hewitt medium Le Breton Y. et al (2015). Essential Genes in the Core Genome of the Human Pathogen Streptococcus pyogenes. Sci. Rep. 5, 9838. [PubMed] 27 Streptococcus pyogenes NZ131 soz 241 Todd-Hewitt medium Le Breton Y. et al (2015). Essential Genes in the Core Genome of the Human Pathogen Streptococcus pyogenes. Sci. Rep. 5, 9838. [PubMed] 28 Streptococcus sanguinis ssa 218 Rich medium Xu, P et al(2011). Genome-wide essential gene identification in Streptococcus sanguinis. Sci. Rep. 1, 125; DOI:10.1038/srep00125. [PubMed] 29 Synechococcus elongatus PCC 7942 syf 682 Rich medium Rubin, Benjamin E., et al. "The essential gene set of a photosynthetic organism." Proceedings of the National Academy of Sciences (2015): 201519220. [PubMed] 30 Vibrio cholerae N16961 vch 779 Rich medium Cameron DE, Urbach MJ,Mekalanos JJ(2008). A defined transposon mutant library and its use in identifying motility genes in Vibrio cholerae. PNAS, 105(25):8736-8741. [PubMed]